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PUBLICATIONS

ORAL AND POSTER PRESENTATIONS

  • TuÄŸberk Deniz KarakaÅŸ, Süreyya Özcan, Halil Mecit Öztop, Burak V. Kabasakal, Characterization of Sugar Beet Leaf Proteins as an Alternative Food Protein, 37th International EFFoST Conference, 6-8 November 2023, Valencia, Spain

  • Hatice Akkulak, Hayri Kerim Ä°nce, Burak V. Kabasakal, Süreyya Özcan, Comparison of XL-MS Software to Identify Protein Interactions, 15th The International Symposium on Health Informatics and Bioinformatics (HIBIT) Conference, 20-22 October 2022, Mersin, Türkiye

  • Ece GöktayoÄŸlu, Burak V. Kabasakal, Süreyya Özcan, Waste into wealth: Green Proteome, ACS Fall 22 Meeting, August 2022, Chicago, IL, USA

  • Nasim Allahyari, Süreyya Özcan, Burak V. Kabasakal, Insights into bacterial membrane protein quality control: YccA and its interaction with FtsH, ACS Fall 22 Meeting, August 2022, Chicago, IL, USA

  • Süreyya Özcan, Hatice Akkulak, Günce Göç, Mehmet Çalıseki, Hayri Kerim Ä°nce, Christiane Schaffitzel, Carlito Lebrilla, Burak V. Kabasakal, Structural insights into protein quality control using cross-linking mass spectrometry, ACS Spring 22 Meeting, March 2022, San Diego, CA, USA.

  • Günce Göç, Sema Aygar, Nasim Allahyari, Zeynep Çolak, Mehmet Çalıseki, Christiane Schaffitzel, Burak V. Kabasakal, Structural Biology of the FtsH-HflKC Complex involved in Protein Quality Control, Turkish Journal of Biochemistry, Special Issue: 32nd National Biochemistry Congress, October 2021, Volume 46, Issue 2, Page 45.

  • Sema Aygar, Günce Göç, Nasim Allahyari, Zeynep Çolak, Mehmet Çalıseki, Christiane Schaffitzel, Burak V. Kabasakal, Structural Studies of FtsH and FtsH Complexes involved in Quality Control, Turkish Journal of Biochemistry, Special Issue: 32nd National Biochemistry Congress, October 2021, Volume 46, Issue 2, Page 45.

  • Febin Varghese, Burak V. Kabasakal, Charles Cotton, Jörg Schumacher, A. Rutherford, Andrea Fantuzzi, James Murray, A Low-Potential Terminal Oxidase Associated with the Iron-Only Nitrogenase from the Nitrogen-Fixing Bacterium Azotobacter vinelandii, The FASEB Journal, Special Issue: Experimental Biology 2021 Meeting, May 2021, Volume 35, Issue S1

  • Burak V. Kabasakal, Atomic Evidence: Crystallography and cryo-EM, Bioinforange Bioinfoconference, 20-22 March 2021, Virtual Conference

  • Burak V. Kabasakal, A journey to life of proteins at sub-nanometer scale, IV. GENÇOMÜ Congress, 6 March 2021, Virtual Conference

  • Burak V. Kabasakal, Structural Basis for the Mechanism of ATP-dependent Acetone Carboxylation, Plastid Preview 2017, University of Cambridge, UK, 4-5 September 2017.

  • Febin Varghese, Burak V. Kabasakal, James W. Murray, Structural basis of nitrogenase conformational protection from oxygen in Azotobacter vinelandii, presented at 20th International Congress on Nitrogen Fixation, Granada, Spain, 3-7 September 2017.

  • Febin Varghese, Andrea Fantuzzi, Burak V. Kabasakal, Jörg Schumacher, James W Murray, Azotobacter vinelandii cytochrome b’: a novel flavocytochrome involved in the oxygen protection of the iron-only nitrogenase, presented at 20th International Congress on Nitrogen Fixation, Granada, Spain, 3-7 September 2017.

  • Burak V. Kabasakal, Structural Basis for the 3-Hydroxypropionate Cycle of Chloroflexus aurantiacus , Young Researchers in Crop Sciences 2017, Rothamsted Research, Herts, UK, 11 July 2017

  • Burak V. Kabasakal, Structural studies of carbon fixation proteins, DAWN Training for Small Angle Scattering, Diamond Light Source, Oxfordshire, 1 July 2017

  • Burak V. Kabasakal, Ciaran Mcfarlane, Charles Cotton, Lucas Lieber, James W. Murray, Understanding the Structural basis of Nitrogenase Resistance to Oxygen, presented at Enhancing photosynthesis in crop plants: targets for improvement meeting, The Royal Society, October 2016.

  • Ciaran Mcfarlane, Burak V. Kabasakal, Charles Cotton, James W. Murray, Structural basis of Calvin Cycle Regulation, presented at Enhancing photosynthesis in crop plants: targets for improvement meeting, The Royal Society, October 2016.

  • Burak V. Kabasakal, Charles Cotton, Lucas Lieber, James W. Murray, Structures of FeSI and FeSII proteins (Shethna proteins I and II) from Azotobacter vinelandii , Materials Structure in Chemistry, Biology, Physics and Technology, 2016, Vol. 23, No. 2, presented at International Conference on the Crystallization of Biological
    Macromolecules (ICCBM’16), Prague, July 2016.

  • also presented at Center for Structural Biology Open Day 2016, Imperial College London, and Graduate School Research Symposium 2016, Imperial College London

  • Burak V. Kabasakal, Charles Cotton, James W. Murray, Structural insights into malonyl-CoA reductase of 3-hydroxypropionate cycle, Acta Crystallographica A, 2015, 71, 202, presented at 29th European Crystallographic Meeting, Rovinj, Croatia, August 2015

  • also presented at Center for Structural Biology Open Day 2015, Imperial College London

  • Senyuva H., Aksahin I., Özcan S., Kabasakal B.V., Rapid, simple and accurate liquid chromatographydiode array detection validated method for the determination of dipyrone in solid and liquid dosage forms, 4th International Aegean Analytical Chemistry Days, Kusadasi, Aydin, Turkey, 2004.

  • Kabasakal B.V., Ozcan S., Senyuva H.Z., Determination of Some Nicotinoid Type Insecticides Analysis in Hazelnut and Hazelnut Products by HPLC/DAD, AUBIBAM - V. National Chromatography Symposium, Eskisehir, Turkey, 2004.

INVITED TALKS

HIGHLIGHTS

Structural proteomics of a bacterial mega membrane protein complex: FtsH-HflK-HflC

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A low-potential terminal oxidase associated with the iron-only nitrogenase from the nitrogen-fixing bacterium Azotobacter vinelandii

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Dynamic lid domain of Chloroflexus aurantiacus Malonyl-CoA reductase controls the reaction

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Sample Preparation for Electron Cryo-Microscopy of Macromolecular Machines

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